PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G112600.1.p
Common NamePRUPE_ppa018718mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 281aa    MW: 30434.1 Da    PI: 4.9113
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G112600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.4e-1191133855
                         HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  Prupe.6G112600.1.p  91 SERRRRGRMKERLYALRSLVPNI-----TKMDKASIVGDAVLYVQDLQ 133
                         6*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.18683132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1685149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-1785149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-1489138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-891133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.78E-798135No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MINGCFDDYN LFCPASTTPG VVFGFNDAVA SDPSASFLGT LSDPSAPLLT TLPNFDGEMK  60
GGEEDHNGED SSGTTTTNKR QKVDRSRTLV SERRRRGRMK ERLYALRSLV PNITKMDKAS  120
IVGDAVLYVQ DLQKQAKKLK AEIESLEASL PGADDHEGYQ DGSTENPSKN KVTNNINLVS  180
KGIIQIDVSQ VEEKGFYVKV ACNKGGGVAA ALYKALESFT SFNVQSSNLN TVSTDRFELT  240
LALNVKECEQ DIINLPNLKL WVTGAFLNQG FELASGFSAQ *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007204923.10.0hypothetical protein PRUPE_ppa018718mg
SwissprotQ0V7X43e-85FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLM5VXF90.0M5VXF9_PRUPE; Uncharacterized protein
STRINGVIT_06s0061g00720.t012e-88(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36793358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.13e-66FER-like regulator of iron uptake